Christophe TATOUT
Chef d'équipe
TATOUT
Christophe
Chef d'équipe
PU
Présentation
2021-: Responsable du Master de Bio-informatics
2017-2021: Coordinateur du projet Européen COST-Action CA16212
2013: Professeur de Génétique et d'Epigénétique, co-responsable de l'équipe 3 (GReD)
2009: Professeur de Génétique et d'Epigénétique, Université Blaise Pascal, membre de l'équipe du Dr Sylvette Tourmente (GReD)
1999-2009: Maize genetics and genomics team at Biogemma, Chappes.
2005: Habilitation à Diriger des Recherches (HDR)
1997-1999: Postdoc, UMR CNRS 6457, Equipe Pr Jean-Marc Deragon
1994-1997: Postdoc, Department of Zoology and Animal Biology, Geneva, Equipe Dr Vincenzo Pirrotta
1990-1993: PhD, URA360, Blaise Pascal University, France, Equipe Pr Hubert Pinon
Recherche
Role of the nuclear periphery in chromatin organization
Discover how and why the spatial organization of chromatin impacts gene expression https://www.youtube.com/watch?v=lK_5EhFux0s
Selected reviews : Tatout et al, Chromosome Res, 2014, and Parry et al, J. Cell Science, 2018) and research articles (Graumann et al, J. Exp. Bot., 2014, and Pawar et al 2016
Publications
The TELOMERE REPEAT BINDING proteins TRB4 and TRB5 function as transcriptional activators of PRC2-controlled genes to regulate plant development.
Publié le 01 Avr 2024 dans Plant communications - pp 100890
Amiard S , Feit L , Vanrobays E , Simon L , Le Goff S , Loizeau L , Wolff L, Butter F, Bourbousse C, Barneche F, Tatout C , Probst AV
Evolutionarily conserved protein motifs drive interactions between the plant nucleoskeleton and nuclear pores
Publié le 21 Sep 2023 dans The Plant Cell
Mermet S , Voisin M , Mordier J , Dubos T , Tutois S , Tuffery P, Baroux C, Tamura K, Probst AV , Vanrobays E , Tatout C
Image analysis workflows to reveal the spatial organization of cell nuclei and chromosomes.
Publié le 30 Déc 2022 dans Nucleus (Austin, Tex.) , vol. 13 - pp 277-299
Randall RS, Jourdain C, Nowicka A, Kaduchová K, Kubová M, Ayoub MA, Schubert V, Tatout C , Colas I, Kalyanikrishna, Desset S , Mermet S , Boulaflous-Stevens A, Kubalová I, Mandáková T, Heckmann S, Lysak MA, Panatta M, Santoro R, Schubert D, Pecinka A, Routh D, Baroux C
Deep learning — promises for 3D nuclear imaging: a guide for biologists.
Publié le 01 Avr 2022 dans Journal of cell science , vol. 135
Mougeot G , Dubos T , Chausse F, Péry E, Graumann K, Tatout C , Evans DE, Desset S
The Histone Chaperone HIRA Is a Positive Regulator of Seed Germination.
Publié le 14 Avr 2021 dans International journal of molecular sciences , vol. 22
Layat E , Bourcy M, Cotterell S , Zdzieszyńska J, Desset S , Duc C , Tatout C , Bailly C, Probst AV
Automated 3D bio-imaging analysis of nuclear organization by NucleusJ 2.0.
Publié le 30 Déc 2020 dans Nucleus (Austin, Tex.) , vol. 11 - pp 315-329
Dubos T , Poulet A , Gonthier-Gueret C, Mougeot G , Vanrobays E , Li Y , Tutois S , Pery E, Chausse F, Probst AV , Tatout C , Desset S
Untangling chromatin interactions.
Publié le 17 Août 2020 dans Journal of experimental botany , vol. 71 - pp 5115-5118
The H3 histone chaperone NASP(SIM3) escorts CenH3 in Arabidopsis.
Publié le 30 Jan 2020 dans The Plant Journal , vol. 101 - pp 71-86
Le Goff S , Keçeli BN, Jeřábková H, Heckmann S, Rutten T, Cotterell S , Schubert V, Roitinger E, Mechtler K, Franklin FCH, Tatout C , Houben A, Geelen D, Probst AV , Lermontova I
Replication-coupled histone H3.1 deposition determines nucleosome composition and heterochromatin dynamics during Arabidopsis seedling development.
Publié le 30 Jan 2019 dans The New phytologist , vol. 221 - pp 385-398
Benoit M , Simon L , Desset S , Duc C , Cotterell S , Poulet A , Le Goff S , Tatout C , Probst AV
Probing the 3D architecture of the plant nucleus with microscopy approaches: challenges and solutions.
Publié le 30 Déc 2019 dans Nucleus (Austin, Tex.) , vol. 10 - pp 181-212
Dumur T, Duncan S, Graumann K, Desset S , Randall RS, Scheid OM, Prodanov D, Tatout C , Baroux C
Computational Methods for Studying the Plant Nucleus.
Publié le 01 Jan 2018 dans Methods in molecular biology (Clifton, N.J.) , vol. 1840 - pp 205-219
Poulet A , Zhou X, Tamura K, Meier I, Tatout C , Graumann K, Evans DE
Investigation of Nuclear Periphery Protein Interactions in Plants Using the Membrane Yeast Two-Hybrid (MbY2H) System.
Publié le 01 Jan 2018 dans Methods in molecular biology (Clifton, N.J.) , vol. 1840 - pp 221-235
Quantitative 3D Analysis of Nuclear Morphology and Heterochromatin Organization from Whole-Mount Plant Tissue Using NucleusJ.
Publié le 01 Jan 2018 dans Methods in molecular biology (Clifton, N.J.) , vol. 1675 - pp 615-632
Genetic and epigenetic variation in 5S ribosomal RNA genes reveals genome dynamics in Arabidopsis thaliana.
Publié le 06 Avr 2018 dans Nucleic acids research , vol. 46 - pp 3019-3033
Simon L , Rabanal FA, Dubos T , Oliver C, Lauber D , Poulet A , Vogt A, Mandlbauer A, Le Goff S , Sommer A, Duborjal H, Tatout C , Probst AV
Spatial organization of chromosome territories in the interphase nucleus of trisomy 21 cells.
Publié le 30 Juin 2018 dans Chromosoma , vol. 127 - pp 247-259
Kemeny S, Tatout C , Salaun G, Pebrel-Richard C, Goumy C, Ollier N, Maurin E, Pereira B, Vago P, Gouas L
Meeting report – INDEPTH kick-off meeting.
Publié le 25 Juin 2018 dans Journal of cell science , vol. 131
Arabidopsis ATRX Modulates H3.3 Occupancy and Fine-Tunes Gene Expression.
Publié le 30 Juil 2017 dans The Plant cell , vol. 29 - pp 1773-1793
Duc C , Benoit M , Détourné G , Simon L , Poulet A , Jung M, Veluchamy A, Latrasse D, Le Goff S , Cotterell S , Tatout C , Benhamed M, Probst AV
Exploring the evolution of the proteins of the plant nuclear envelope.
Publié le 02 Jan 2017 dans Nucleus (Austin, Tex.) , vol. 8 - pp 46-59
The LINC complex contributes to heterochromatin organisation and transcriptional gene silencing in plants.
Publié le 01 Fév 2017 dans Journal of cell science , vol. 130 - pp 590-601
Poulet A , Duc C , Voisin M , Desset S , Tutois S , Vanrobays E , Benoit M , Evans DE, Probst AV , Tatout C
A novel family of plant nuclear envelope-associated proteins.
Publié le 30 Oct 2016 dans Journal of experimental botany , vol. 67 - pp 5699-5710
Pawar V, Poulet A , Détourné G , Tatout C , Vanrobays E , Evans DE, Graumann K
Marker gene tethering by nucleoporins affects gene expression in plants.
Publié le 01 Jan 2015 dans Nucleus (Austin, Tex.) , vol. 6 - pp 471-8
Smith S, Galinha C, Desset S , Tolmie F, Evans D, Tatout C , Graumann K
NucleusJ: an ImageJ plugin for quantifying 3D images of interphase nuclei.
Publié le 01 Avr 2015 dans Bioinformatics (Oxford, England) , vol. 31 - pp 1144-6
Poulet A , Arganda-Carreras I, Legland D, Probst AV , Andrey P, Tatout C
The histone chaperone complex HIR maintains nucleosome occupancy and counterbalances impaired histone deposition in CAF-1 complex mutants.
Publié le 30 Mar 2015 dans The Plant journal : for cell and molecular biology , vol. 81 - pp 707-22
Duc C , Benoit M , Le Goff S , Simon L , Poulet A , Cotterell S , Tatout C , Probst AV
Structure and Function of Centromeric and Pericentromeric Heterochromatin in Arabidopsis thaliana.
Publié le 30 Nov 2015 dans Frontiers in plant science , vol. 6 - pp 1049
The plant LINC complex at the nuclear envelope.
Publié le 30 Juin 2014 dans Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology , vol. 22 - pp 241-52
Tatout C , Evans DE, Vanrobays E , Probst AV , Graumann K
Characterization of two distinct subfamilies of SUN-domain proteins in Arabidopsis and their interactions with the novel KASH-domain protein AtTIK.
Publié le 30 Déc 2014 dans Journal of experimental botany , vol. 65 - pp 6499-512
Graumann K, Vanrobays E , Tutois S , Probst AV , Evans DE, Tatout C
Evolutionary history of Methyltransferase 1 genes in hexaploid wheat.
Publié le 23 Oct 2014 dans BMC genomics , vol. 15 - pp 922
Thomas M, Pingault L, Poulet A , Duarte J, Throude M, Faure S, Pichon JP, Paux E, Probst AV , Tatout C
Characterization of a cinnamoyl-CoA reductase 1 (CCR1) mutant in maize: effects on lignification, fibre development, and global gene expression.
Publié le 30 Juil 2011 dans Journal of experimental botany , vol. 62 - pp 3837-48
Tamasloukht B, Wong Quai Lam MS, Martinez Y, Tozo K, Barbier O, Jourda C, Jauneau A, Borderies G, Balzergue S, Renou JP, Huguet S, Martinant JP, Tatout C , Lapierre C, Barrière Y, Goffner D, Pichon M
empty pericarp4 encodes a mitochondrion-targeted pentatricopeptide repeat protein necessary for seed development and plant growth in maize.
Publié le 30 Jan 2007 dans The Plant cell , vol. 19 - pp 196-210
Gutiérrez-Marcos JF, Dal Prà M, Giulini A, Costa LM, Gavazzi G, Cordelier S, Sellam O, Tatout C , Paul W, Perez P, Dickinson HG, Consonni G
Two cytosolic glutamine synthetase isoforms of maize are specifically involved in the control of grain production.
Publié le 30 Nov 2006 dans The Plant cell , vol. 18 - pp 3252-74
Martin A, Lee J, Kichey T, Gerentes D, Zivy M, Tatout C , Dubois F, Balliau T, Valot B, Davanture M, Tercé-Laforgue T, Quilleré I, Coque M, Gallais A, Gonzalez-Moro MB, Bethencourt L, Habash DZ, Lea PJ, Charcosset A, Perez P, Murigneux A , Sakakibara H, Edwards KJ, Hirel B
UDP-glucose dehydrogenases of maize: a role in cell wall pentose biosynthesis.
Publié le 15 Oct 2005 dans The Biochemical journal , vol. 391 - pp 409-15
Kärkönen A, Murigneux A , Martinant JP, Pepey E, Tatout C , Dudley BJ, Fry SC
Utilization of the IR hybrid dysgenesis system in Drosophila to test in vivo mobilization of synthetic SINEs sharing 3′ homology with the I factor.
Publié le 20 Fév 2002 dans Gene , vol. 285 - pp 239-45
Pélissier T , Tatout C , Lavige JM, Busseau I, Bucheton A, Deragon JM
Extensive conservation of sequences and chromatin structures in the bxd polycomb response element among Drosophilid species.
Publié le 30 Jan 2002 dans The International journal of developmental biology , vol. 46 - pp 133-41
Dellino GI, Tatout C , Pirrotta V
Target sites for SINE integration in Brassica genomes display nuclear matrix binding activity.
Publié le 01 Jan 2001 dans Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology , vol. 9 - pp 325-37
Tikhonov AP, Lavie L, Tatout C , Bennetzen JL, Avramova Z, Deragon JM
Structure of a polycomb response element and in vitro binding of polycomb group complexes containing GAGA factor.
Publié le 30 Mai 2000 dans Molecular and cellular biology , vol. 20 - pp 3187-97
Horard B, Tatout C , Poux S, Pirrotta V
P-element transposition in Drosophila melanogaster: influence of size and arrangement in pairs.
Publié le 30 Avr 2000 dans Molecular & general genetics : MGG , vol. 263 - pp 445-54
Delattre M, Tatout C , Coen D
Artificial and epigenetic regulation of the I factor, a nonviral retrotransposon of Drosophila melanogaster.
Publié le 30 Déc 2000 dans Genetics , vol. 156 - pp 1867-78
Gauthier E, Tatout C , Pinon H
S1 SINE retroposons are methylated at symmetrical and non-symmetrical positions in Brassica napus: identification of a preferred target site for asymmetrical methylation.
Publié le 30 Jan 1999 dans Plant molecular biology , vol. 39 - pp 243-55
Goubely C , Arnaud P , Tatout C , Heslop-Harrison JS, Deragon JM
Similar target site selection occurs in integration of plant and mammalian retroposons.
Publié le 30 Oct 1998 dans Journal of molecular evolution , vol. 47 - pp 463-70
Tatout C , Lavie L, Deragon JM
Rapid evaluation in Escherichia coli of antisense RNAs and ribozymes.
Publié le 30 Nov 1998 dans Letters in applied microbiology , vol. 27 - pp 297-301
Tatout C , Gauthier E, Pinon H
Germ-line expression of a functional LINE from Drosophila melanogaster: fine characterization allows for potential investigations of trans-regulators.
Publié le 30 Mar 1994 dans The International journal of developmental biology , vol. 38 - pp 27-33
Tatout C , Docquier M, Lachaume P, Mesure M, Lécher P, Pinon H
